STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_08483Uncharacterized protein. (301 aa)    
Predicted Functional Partners:
V500_10412
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
   
 0.732
V500_05923
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 0.720
V500_10617
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
    
 0.708
V500_03371
SGL domain-containing protein.
    
 0.690
V500_05647
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.627
V500_05327
Uncharacterized protein.
     
 0.618
V500_06517
Uncharacterized protein.
   
 0.604
V500_01079
Uncharacterized protein.
   
 0.604
V500_01041
MR_MLE domain-containing protein.
    
  0.571
V500_07127
Protein kinase domain-containing protein.
  
 
 0.468
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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