STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_02205NAAA-beta domain-containing protein. (396 aa)    
Predicted Functional Partners:
V500_06961
Neutral ceramidase.
     
 0.794
V500_05715
DAGKc domain-containing protein.
     
 0.792
V500_02183
Uncharacterized protein.
     
 0.778
V500_09820
Uncharacterized protein.
     
 0.774
V500_08197
acidPPc domain-containing protein.
    
 0.770
V500_11611
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family.
   
 0.670
V500_08718
Metallophos domain-containing protein.
   
 0.670
V500_05435
Uncharacterized protein.
   
 
 0.644
V500_05864
Uncharacterized protein.
   
 
 0.644
V500_10225
Uncharacterized protein.
   
 
 0.561
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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