STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_08276TauD domain-containing protein. (441 aa)    
Predicted Functional Partners:
V500_04784
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.600
V500_06629
PKS_AT domain-containing protein.
  
 0.579
V500_06458
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.560
V500_06216
Thymidylat_synt domain-containing protein.
   
 
 0.552
V500_08552
TPR_REGION domain-containing protein.
    
 0.513
V500_09450
2Fe-2S ferredoxin-type domain-containing protein.
   
  0.513
V500_07185
Lactamase_B domain-containing protein.
   
  0.513
V500_11511
Pex2_Pex12 domain-containing protein.
    
  0.486
V500_09709
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.479
V500_01267
FSH1 domain-containing protein.
   
 
  0.475
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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