STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V500_06048DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1208 aa)    
Predicted Functional Partners:
V500_01272
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
V500_06172
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.998
V500_06851
DNA_mis_repair domain-containing protein.
 
 0.992
V500_06591
Uncharacterized protein.
  
 0.988
V500_00547
Uncharacterized protein.
   
 0.974
V500_09258
DNA_mis_repair domain-containing protein.
 
 0.970
V500_03568
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.960
V500_09653
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.958
V500_06954
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 0.941
V500_01343
MutL_C domain-containing protein.
  
 0.928
Your Current Organism:
Pseudogymnoascus sp. VKMF4518
NCBI taxonomy Id: 1420913
Other names: P. sp. VKM F-4518 (FW-2643), Pseudogymnoascus sp. VKM F-4518 (FW-2643)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.