STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V501_07260ANK_REP_REGION domain-containing protein. (522 aa)    
Predicted Functional Partners:
V501_08564
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.646
V501_08669
Uncharacterized protein.
    
  0.600
V501_10454
Uncharacterized protein.
    
  0.569
V501_06746
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.569
V501_06969
Uncharacterized protein.
    
  0.569
V501_08967
Uncharacterized protein.
    
  0.569
V501_09482
Rho-GAP domain-containing protein.
    
 0.534
V501_10616
UBA domain-containing protein.
    
  0.523
V501_03359
ANK_REP_REGION domain-containing protein.
   
  0.518
V501_02403
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
   
  0.508
Your Current Organism:
Pseudogymnoascus sp. VKMF4519
NCBI taxonomy Id: 1420914
Other names: P. sp. VKM F-4519 (FW-2642), Pseudogymnoascus sp. VKM F-4519 (FW-2642)
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