STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V502_09804TLDc domain-containing protein. (342 aa)    
Predicted Functional Partners:
V502_08583
Uncharacterized protein.
      
 0.428
V502_06288
TPR_REGION domain-containing protein.
      
 0.422
V502_06274
Uncharacterized protein.
    
 
 0.414
V502_06689
Pyruvate carboxyltransferase domain-containing protein.
    
 
 0.413
V502_08616
Uncharacterized protein.
    
 
 0.408
V502_01540
Uncharacterized protein.
      
 0.403
Your Current Organism:
Pseudogymnoascus sp. VKMF4520
NCBI taxonomy Id: 1420915
Other names: P. sp. VKM F-4520 (FW-2644), Pseudogymnoascus sp. VKM F-4520 (FW-2644)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.