STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V502_09738Uncharacterized protein. (815 aa)    
Predicted Functional Partners:
V502_07861
EF-hand domain-containing protein.
    
 0.849
V502_04714
Sister chromatid cohesion protein.
    
 0.694
V502_02245
Sister chromatid cohesion protein.
    
 0.694
V502_05228
ANK_REP_REGION domain-containing protein.
    
  0.536
V502_02008
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.486
V502_02449
Uncharacterized protein.
    
  0.486
V502_07491
MRG domain-containing protein.
    
  0.479
V502_10986
Uncharacterized protein.
    
  0.475
V502_10984
Uncharacterized protein.
    
  0.475
V502_10341
Amidase domain-containing protein.
    
  0.475
Your Current Organism:
Pseudogymnoascus sp. VKMF4520
NCBI taxonomy Id: 1420915
Other names: P. sp. VKM F-4520 (FW-2644), Pseudogymnoascus sp. VKM F-4520 (FW-2644)
Server load: low (22%) [HD]