STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V502_09304Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (250 aa)    
Predicted Functional Partners:
V502_09370
t-SNARE coiled-coil homology domain-containing protein.
    
 0.999
V502_01340
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.999
V502_05592
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.998
V502_04498
Uncharacterized protein.
    
 0.990
V502_01754
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.990
V502_06727
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.989
V502_06669
Uncharacterized protein.
    
 0.982
V502_11305
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.966
V502_04061
WH2 domain-containing protein.
    
 
 0.965
V502_02701
Uncharacterized protein.
    
 0.935
Your Current Organism:
Pseudogymnoascus sp. VKMF4520
NCBI taxonomy Id: 1420915
Other names: P. sp. VKM F-4520 (FW-2644), Pseudogymnoascus sp. VKM F-4520 (FW-2644)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.