STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V502_05428Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (194 aa)    
Predicted Functional Partners:
V502_09611
Uncharacterized protein.
  
 
 0.999
V502_10858
Uncharacterized protein.
  
 
 0.999
V502_07354
Uncharacterized protein.
  
 
 0.999
V502_08169
KOW domain-containing protein.
  
 
 0.999
V502_06840
Ribosomal_L18_c domain-containing protein.
  
 
 0.999
V502_06521
Uncharacterized protein.
 
 
 0.999
V502_06308
Uncharacterized protein.
  
 
 0.999
V502_07092
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.999
V502_09732
Ribosomal_L23eN domain-containing protein.
  
 
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.999
Your Current Organism:
Pseudogymnoascus sp. VKMF4520
NCBI taxonomy Id: 1420915
Other names: P. sp. VKM F-4520 (FW-2644), Pseudogymnoascus sp. VKM F-4520 (FW-2644)
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