STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V502_01397Uncharacterized protein. (976 aa)    
Predicted Functional Partners:
V502_09230
Uncharacterized protein.
    
 0.794
V502_05646
Uncharacterized protein.
    
 0.794
V502_00788
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.786
V502_01290
Uncharacterized protein.
    
  0.786
V502_06469
Uncharacterized protein.
    
  0.580
V502_09564
PINc domain-containing protein.
    
  0.542
V502_08795
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.542
V502_04488
Uncharacterized protein.
    
  0.542
V502_06963
CBF domain-containing protein.
    
  0.542
V502_03740
Uncharacterized protein.
    
  0.542
Your Current Organism:
Pseudogymnoascus sp. VKMF4520
NCBI taxonomy Id: 1420915
Other names: P. sp. VKM F-4520 (FW-2644), Pseudogymnoascus sp. VKM F-4520 (FW-2644)
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