STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000504425_02297Unannotated protein. (67 aa)    
Predicted Functional Partners:
OO17_21345
Unannotated protein.
 
  
 0.967
OO17_21350
Unannotated protein.
 
  
 0.944
OO17_21340
Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.908
OO17_25890
Unannotated protein.
 
    0.906
GCA_000504425_02290
Unannotated protein.
 
  
 0.888
OO17_21335
Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.884
GCA_000504425_02293
Unannotated protein.
 
    0.880
OO17_21330
Unannotated protein; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.843
GCA_000504425_02295
Unannotated protein.
 
    0.803
OO17_26475
Unannotated protein.
 
  
 0.788
Your Current Organism:
Rhodopseudomonas palustris JSC3b
NCBI taxonomy Id: 1421013
Other names: R. palustris JSC-3b, Rhodopseudomonas palustris JSC-3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.