node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMA50831.1 | AMA50834.1 | AN935_00540 | AN935_00555 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.521 |
AMA50831.1 | AMA52343.1 | AN935_00540 | AN935_08620 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.541 |
AMA50831.1 | AMA53266.1 | AN935_00540 | AN935_13675 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
AMA50831.1 | obg | AN935_00540 | AN935_13670 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.597 |
AMA50831.1 | rplA | AN935_00540 | AN935_00525 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.676 |
AMA50831.1 | rplJ | AN935_00540 | AN935_00530 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.699 |
AMA50831.1 | rplL | AN935_00540 | AN935_00535 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.749 |
AMA50831.1 | rpoB | AN935_00540 | AN935_00545 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.732 |
AMA50831.1 | rpoC | AN935_00540 | AN935_00550 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.614 |
AMA50831.1 | rpsG | AN935_00540 | AN935_00565 | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.551 |
AMA50834.1 | AMA50831.1 | AN935_00555 | AN935_00540 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.521 |
AMA50834.1 | rplA | AN935_00555 | AN935_00525 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.975 |
AMA50834.1 | rplJ | AN935_00555 | AN935_00530 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.980 |
AMA50834.1 | rplL | AN935_00555 | AN935_00535 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. | 0.540 |
AMA50834.1 | rpoB | AN935_00555 | AN935_00545 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.671 |
AMA50834.1 | rpoC | AN935_00555 | AN935_00550 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.677 |
AMA50834.1 | rpsG | AN935_00555 | AN935_00565 | 50S ribosomal protein L7; In Bacillus subtilis this non-essential protein associates with the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL8 family. | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.988 |
AMA52343.1 | AMA50831.1 | AN935_08620 | AN935_00540 | UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.541 |
AMA53266.1 | AMA50831.1 | AN935_13675 | AN935_00540 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
AMA53266.1 | obg | AN935_13675 | AN935_13670 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.945 |