STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tkmACapsule biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
AMA54123.1
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
AMA53940.1
Tyrosine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
AMA54122.1
Tyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.995
AMA54771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  
0.842
AMA54121.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.839
AMA50792.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.819
AMA53931.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.607
AMA54056.1
UDP-phosphate N-acetylgalactosaminyl-1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.574
AMA54770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.560
AMA50878.1
Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.477
Your Current Organism:
Bacillus subtilis inaquosorum
NCBI taxonomy Id: 483913
Other names: B. subtilis subsp. inaquosorum, BGSC 3A28, Bacillus subtilis subsp. inaquosorum, Bacillus subtilis subsp. inaquosorum Rooney et al. 2009, DSM 22148, KCTC 13429, NRRL B-23052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.