STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gal_03189Hypothetical protein. (154 aa)    
Predicted Functional Partners:
Gal_03190
Zn-dependent hydrolase; Including glyoxylases.
       0.815
Gal_03191
Acyl-CoA dehydrogenase.
       0.708
Gal_03188
Hypothetical protein.
 
     0.705
Gal_03186
Hypothetical protein.
 
     0.695
Gal_03192
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family.
       0.610
Gal_03187
Bacterial aa3 type cytochrome c oxidase subunit IV.
       0.592
Gal_02527
Hypothetical protein; DUF2484.
  
     0.558
Gal_00473
Hypothetical protein.
  
     0.472
Gal_00476
Hypothetical protein.
  
     0.470
Gal_00471
Hypothetical protein.
  
     0.467
Your Current Organism:
Phaeobacter gallaeciensis
NCBI taxonomy Id: 1423144
Other names: P. gallaeciensis DSM 26640, Phaeobacter gallaeciensis BS107, Phaeobacter gallaeciensis CIP 105210, Phaeobacter gallaeciensis DSM 26640
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.