STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIA82515.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
rlmF
23S rRNA methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.
  
     0.641
KIA82513.1
L-alanine-DL-glutamate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
KIA82514.1
Aminotransferase class I/II; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
KIA82512.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
KIA84058.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.426
KIA85164.1
Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.
  
    0.414
KIA82537.1
Excinuclease ABC subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.402
Your Current Organism:
Flavobacterium sp. AED
NCBI taxonomy Id: 1423323
Other names: F. sp. AED
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.