STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V565_301580Putative RPS22A ribosomal protein. (59 aa)    
Predicted Functional Partners:
V565_179660
Translation elongation factor eEF3.
   
 
 0.992
V565_054410
mRNA export factor elf1.
   
 
 0.992
V565_168620
60S ribosomal protein L4.
 
 0.977
V565_039060
40s ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.976
V565_027580
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.976
V565_260900
40S ribosomal protein S3.
  
 0.976
V565_011170
40S ribosomal protein S29.
  
 0.976
V565_029630
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.976
V565_106920
40S ribosomal protein S20.
  
 0.975
V565_063500
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.975
Your Current Organism:
Rhizoctonia solani 123E
NCBI taxonomy Id: 1423351
Other names: R. solani 123E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.