STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V565_239450Putative reverse transcriptase from transposon X-element protein. (1802 aa)    
Predicted Functional Partners:
V565_021790
Cyclin-dependent kinase inhibitor.
    
 0.760
V565_010740
26S proteasome non-ATPase regulatory protein.
    
  0.685
V565_114530
60S ribosomal protein L21-A.
   
   0.675
V565_027180
Ribosomal protein L13.
   
   0.648
V565_188110
60S ribosomal protein L2/L8.
   
 
 0.644
V565_064200
Ribosomal protein L2.
   
 
 0.607
V565_176700
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.573
V565_103910
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.561
V565_001340
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.561
V565_233240
Import receptor subunit TOM40.
    
  0.560
Your Current Organism:
Rhizoctonia solani 123E
NCBI taxonomy Id: 1423351
Other names: R. solani 123E
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