STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V565_001740Lincomycin-condensing protein lmbA. (577 aa)    
Predicted Functional Partners:
V565_065780
Glutathione synthetase.
   
 
 0.832
V565_097110
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.827
V565_238940
Leucine aminopeptidase.
     
 0.826
V565_089790
Glutamate synthase (NADPH).
     
 0.822
V565_103570
5-oxoprolinase (ATP-hydrolysing).
    
 0.809
V565_080830
Cytosol nonspecific dipeptidase.
    
 0.809
V565_032560
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.808
V565_032160
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.806
V565_143040
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.806
V565_015420
1-cys peroxiredoxin.
    
 0.804
Your Current Organism:
Rhizoctonia solani 123E
NCBI taxonomy Id: 1423351
Other names: R. solani 123E
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