STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK94529.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
KRK94530.1
Hypothetical protein.
  
    0.788
KRK95908.1
Alcohol dehydrogenase.
  
     0.712
KRK94138.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.640
KRK94139.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.640
KRK94531.1
Hypothetical protein.
       0.555
KRK94528.1
Cytidine deaminase.
       0.484
KRK94787.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
 
  
 0.455
KRK95804.1
Threonine dehydrogenase related Zn-dependent dehydrogenase.
 
 
 0.451
KRK93951.1
3-hydroxyisobutyrate dehydrogenase.
  
  
  0.442
KRK95807.1
Threonine dehydrogenase related Zn-dependent dehydrogenase.
 
 
 0.434
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.