STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK94182.1Hypothetical protein. (389 aa)    
Predicted Functional Partners:
KRK96316.1
N-acetylmuramoyl-L-alanine amidase.
 
  
  0.816
prsA
Peptidylprolyl isomerase; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
   
 
 0.806
KRK94587.1
Surface layer protein slpc.
  
     0.769
KRK94955.1
Hypothetical protein.
  
     0.769
KRK94953.1
Surface layer protein a.
  
     0.767
KRK96674.1
Hypothetical protein.
  
     0.766
KRK96331.1
Hypothetical protein.
  
     0.763
KRK96228.1
Hypothetical protein.
  
     0.761
KRK96362.1
Surface protein.
  
 
   0.753
KRK94956.1
Hypothetical protein.
  
     0.741
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.