STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK93907.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
KRK95172.1
Glycosyltransferase.
  
     0.523
KRK95604.1
Hypothetical protein.
  
     0.512
KRK94947.1
Hypothetical protein.
  
     0.501
KRK96191.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
     0.474
KRK93905.1
ABC superfamily ATP binding cassette transporter, membrane protein.
       0.467
KRK93906.1
ABC superfamily ATP binding cassette transporter, ABC protein.
       0.467
KRK96253.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.466
KRK94791.1
Hypothetical protein.
  
     0.448
KRK96189.1
Lyzozyme M1 (1,4-beta-N-acetylmuramidase).
  
     0.428
KRK96228.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
Server load: low (24%) [HD]