STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK94120.1ROK family protein. (368 aa)    
Predicted Functional Partners:
KRK94119.1
Short-chain dehydrogenase reductase SDR.
 
 
  0.848
KRK94118.1
Carbohydrate kinase, FGGY family protein.
 
  
 0.816
KRK95611.1
Kinase, PfkB family protein.
  
 
 0.553
KRK94645.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
   
 0.489
KRK94327.1
Transcriptional regulator sugar kinase.
 
  
 
0.474
KRK94984.1
Teichoic acid polysaccharide glycosyl transferase.
  
    0.469
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.468
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.449
KRK95620.1
Transcriptional regulator sugar kinase, xylose operon regulator.
  
     0.448
KRK94646.1
Translaldolase.
  
 
 0.445
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.