STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95116.1Cytochrome bd-type quinol oxidase, subunit 1. (466 aa)    
Predicted Functional Partners:
KRK95117.1
Cytochrome bd-type quinol oxidase, subunit 2.
 
 0.999
KRK95119.1
Thiol reductant ABC exporter, CydD subunit.
  
 0.972
KRK95120.1
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
  
 0.967
KRK96214.1
NADH dehydrogenase, FAD-containing subunit.
 
   
 0.712
KRK96733.1
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
   
 0.657
KRK94420.1
Cytochrome bd biosynthesis ABC-type transporter, ATPase and permease component.
 
  
 0.650
KRK96732.1
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
     0.502
KRK96810.1
Phosphocarrier protein HPr.
      
 0.456
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.