STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95124.1cps1A protein. (326 aa)    
Predicted Functional Partners:
KRK95134.1
Hypothetical protein.
 
  
 0.935
KRK95129.1
cps1F protein.
  
    0.924
KRK95126.1
cps1C protein.
 
  
 0.913
KRK95125.1
cps1B protein.
 
  
 0.898
KRK95127.1
cps1D protein.
    0.894
KRK95128.1
cps1E protein.
 
    0.873
KRK95123.1
cps1E protein.
 
    0.870
KRK95132.1
cps1I protein.
  
  
 0.796
KRK95131.1
cps1H protein.
 
  
 0.753
KRK95130.1
cps1G protein.
 
  
 0.733
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.