STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96812.1Glycosyltransferase. (392 aa)    
Predicted Functional Partners:
KRK96813.1
Glycosyltransferase.
 
 
 0.992
KRK96746.1
Lipid kinase.
   
 
  0.954
mprF
Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
  
 0.871
KRK96340.1
Lipopolysaccharide glycosyltransferase.
 
 
  0.756
KRK94158.1
Hypothetical protein.
   
 
 0.740
KRK94157.1
Accessory secretory protein Asp2.
   
 
 0.720
KRK96675.1
Oxidoreductase.
 
      0.686
KRK96815.1
Hypothetical protein.
       0.617
KRK96816.1
Phosphoglycerol transferase alkaline phosphatase superfamily protein.
  
 
  0.580
KRK96810.1
Phosphocarrier protein HPr.
       0.537
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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