STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96330.1Sugar ABC transporter substrate-binding protein. (418 aa)    
Predicted Functional Partners:
KRK96329.1
Sugar ABC transporterpermease.
 0.997
KRK96327.1
Sugar ABC transporterATPase.
 
 0.996
KRK94651.1
ABC transporter permease.
 
 0.995
KRK96328.1
Sugar ABC transporterpermease.
 
 0.995
KRK94650.1
Sugar ABC superfamily ATP binding cassette transporter, membrane protein.
 0.989
KRK94652.1
Sugar abc transporter, atp-binding protein; Belongs to the ABC transporter superfamily.
 
 0.962
KRK96334.1
Transcriptional regulator.
  
     0.558
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
 0.440
KRK96491.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
  
 
  0.402
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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