STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96402.1Acetyltransferase. (178 aa)    
Predicted Functional Partners:
KRK96403.1
HD superfamily hydrolase.
       0.777
KRK94476.1
Immunity protein PlnI.
  
     0.746
KRK96159.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.667
KRK96253.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.648
KRK96716.1
Hypothetical protein.
  
     0.636
KRK95699.1
Signal transduction protein.
  
    0.632
KRK94019.1
Hypothetical protein.
  
     0.611
KRK95697.1
Signal transduction protein.
  
    0.580
KRK94888.1
Hypothetical protein.
  
     0.576
KRK95644.1
Transcriptional regulator.
  
    0.537
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.