STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96284.1Replication initiator A domain protein. (379 aa)    
Predicted Functional Partners:
KRK96283.1
RelB DinJ family addiction module antitoxin.
 
     0.802
KRK96282.1
Hypothetical protein.
  
     0.770
KRK96280.1
Nicking enzyme (traa)-like.
  
     0.769
KRK96281.1
Hypothetical protein.
  
     0.765
KRK96285.1
Cobyrinic acid ac-diamide synthase.
  
     0.726
KRK95118.1
Hypothetical protein.
  
     0.662
KRK94487.1
ATPase.
  
     0.611
KRK94507.1
Hypothetical protein.
  
     0.570
KRK96294.1
Ltrc.
  
     0.519
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.