STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK95897.1Hypothetical protein. (430 aa)    
Predicted Functional Partners:
KRK95898.1
Hypothetical protein.
 
  
 0.976
KRK95896.1
Signal transduction histidine kinase.
 
  
 0.904
KRK95895.1
DNA-binding response regulator.
  
  
 0.716
KRK94290.1
Replication initiation membrane attachment protein.
  
     0.685
KRK96807.1
Hypothetical protein.
  
     0.632
KRK94808.1
TPR repeat-containing protein.
  
     0.624
KRK94978.1
Hypothetical protein.
  
     0.604
KRK95899.1
Beta-lactamase superfamily hydrolase.
  
  
 0.600
KRK93786.1
Cell division membrane protein; Belongs to the SEDS family.
  
    0.588
KRK93909.1
Hypothetical protein.
  
     0.583
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.