STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96041.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
KRK96040.1
DNA polymerase V subunit UmuC.
 
    0.977
KRK96288.1
ImpB MucB SamB family protein.
  
    0.599
KRK96042.1
Major facilitator transporter.
 
     0.555
dinB
Nucleotidyltransferase DNA polymerase for DNA repair; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
    0.545
KRK96039.1
DJ-1 PfpI family protein.
       0.533
KRK95622.1
Hypothetical protein.
   
    0.524
KRK94927.1
Hypothetical protein.
  
     0.511
KRK96754.1
Hypothetical protein.
  
     0.486
KRK96046.1
Hypothetical protein.
  
     0.435
KRK96256.1
Hypothetical protein.
  
     0.404
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.