STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK96048.1Hypothetical protein. (366 aa)    
Predicted Functional Partners:
KRK96712.1
Hypothetical protein.
 
  
  0.808
KRK94152.1
Hypothetical protein.
  
     0.673
KRK96714.1
Family 2 glycosyl transferase.
 
   
 0.665
KRK95817.1
Hypothetical protein.
  
     0.618
KRK94985.1
Hypothetical protein.
  
     0.590
KRK94090.1
Beta-glucosidase-related glycosidase.
    
 0.567
KRK95733.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
   
 0.540
KRK96218.1
Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family.
   
 0.540
KRK95716.1
Csn protein; Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan.
     
 0.531
KRK95134.1
Hypothetical protein.
    
 0.529
Your Current Organism:
Lactobacillus acidifarinae
NCBI taxonomy Id: 1423715
Other names: L. acidifarinae DSM 19394, Lactobacillus acidifarinae DSM 19394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.