STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK46462.1Penicillin-binding protein. (692 aa)    
Predicted Functional Partners:
KRK46297.1
Bifunctional dimerization transpeptidase.
 
  
0.956
KRK46239.1
Cell division membrane protein; Belongs to the SEDS family.
 
 
 0.945
KRK46281.1
Cell shape determining protein mrec; Involved in formation and maintenance of cell shape.
 
 
 0.932
divIB
Cell division initiation protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.908
KRK46552.1
Multimodular transpeptidase-transglycosylase PBP 1A.
 
 
 0.879
KRK46330.1
Cell division protein ftsw; Belongs to the SEDS family.
 
 
 0.869
KRK46194.1
Membrane carboxypeptidase, penicillin-binding protein.
 
 
 0.856
KRK46408.1
Membrane carboxypeptidase (penicillin-binding protein).
 
 
 0.839
gpsB
Cell division protein GpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
 
  
 0.766
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 0.758
Your Current Organism:
Lactobacillus algidus
NCBI taxonomy Id: 1423719
Other names: L. algidus DSM 15638, Lactobacillus algidus DSM 15638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.