STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK46477.1Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
KRK46476.1
Hypothetical protein.
       0.664
KRK45876.1
Hypothetical protein.
  
     0.566
KRK45703.1
Hypothetical protein.
  
    0.490
KRK46188.1
YwnB.
  
    0.455
KRK45721.1
Dihydrofolate reductase.
   
    0.453
KRK45626.1
Hypothetical protein.
  
     0.449
KRK45077.1
Hypothetical protein.
 
    0.415
KRK46467.1
Hypothetical protein.
 
    0.412
Your Current Organism:
Lactobacillus algidus
NCBI taxonomy Id: 1423719
Other names: L. algidus DSM 15638, Lactobacillus algidus DSM 15638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.