STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK46549.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
dinG
ATP-dependent helicase DinG; 3'-5' exonuclease.
 
    0.764
KRK46551.1
Primosome component related protein.
 
     0.742
KRK45431.1
Hypothetical protein.
  
     0.692
asnS
asparaginyl-tRNA synthetase.
       0.685
KRK46622.1
Hypothetical protein.
  
     0.662
KRK45849.1
Hypothetical protein.
  
     0.656
KRK46624.1
Hypothetical protein.
  
     0.593
KRK46282.1
Rod shape-determining protein MreD.
  
     0.590
KRK46547.1
Mevalonate kinase.
 
     0.588
KRK46431.1
Chromosome replication initiation membrane attachment protein.
  
    0.566
Your Current Organism:
Lactobacillus algidus
NCBI taxonomy Id: 1423719
Other names: L. algidus DSM 15638, Lactobacillus algidus DSM 15638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.