STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK45975.1ABC transporter family protein. (241 aa)    
Predicted Functional Partners:
KRK45973.1
Cobalt abc transporter, substrate-binding protein.
 
 0.999
KRK45974.1
Hypothetical protein.
 
 0.999
KRK45297.1
Hypothetical protein.
 0.994
ecfA
Cobalt transporter atp-binding subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.902
KRK45972.1
Transcription regulator.
 
  
 0.891
KRK45939.1
Hypothetical protein.
 
 
 0.864
KRK45567.1
Hypothetical protein.
   
 
 0.794
KRK45746.1
Hypothetical protein.
   
 0.788
KRK45591.1
Oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
0.780
KRK45929.1
Integral membrane protein.
   
 
 0.705
Your Current Organism:
Lactobacillus algidus
NCBI taxonomy Id: 1423719
Other names: L. algidus DSM 15638, Lactobacillus algidus DSM 15638
Server load: low (24%) [HD]