STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK77536.1ABC transporter, ATP-binding protein. (250 aa)    
Predicted Functional Partners:
KRK77535.1
Peptide ABC transporter permease transmembrane protein.
 
 0.992
KRK77527.1
Permease.
 
 0.971
KRK74606.1
Drug ABC exporter, ATP-binding subunit.
   
0.897
KRK77550.1
Oligopeptide ABC transporter, membrane-spanning subunit.
 
 
  
 0.891
KRK75436.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
0.855
KRK76849.1
ABC transporter ATP-binding protein.
     
0.854
KRK75008.1
Multidrug ABC transporter ATPase permease.
     
0.814
KRK77753.1
ABC transporter, ATP-binding protein.
 
    
0.801
KRK78313.1
Amino acid ABC transporter permease component.
 
 
  
 0.795
KRK78375.1
Permease.
  
 
 0.706
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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