STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK76854.1GntR family transcriptional regulator. (231 aa)    
Predicted Functional Partners:
KRK76858.1
Hypothetical protein.
 
    0.743
KRK76856.1
PTS system, lactose cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.709
KRK76855.1
Phosphotransferase system lactose cellobiose-specific llB subunit family protein.
 
     0.629
KRK76852.1
Transcription regulator.
 
    
0.544
KRK76857.1
PTS system, cellobiose-specific IIA component.
 
     0.525
KRK76860.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
     0.506
KRK76853.1
GDSL family lipase.
  
    0.501
KRK76414.1
AraC-like transcriptional regulator.
   
  
 0.488
KRK75210.1
AraC family transcriptional regulator.
   
  
 0.488
KRK77896.1
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.477
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.