STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK76536.1Response regulator. (243 aa)    
Predicted Functional Partners:
KRK76535.1
Histidine protein kinase plnck.
 
 0.987
KRK77611.1
Hypothetical protein.
 
  
 0.922
KRK78087.1
Stxk.
 
  
 0.922
KRK77918.1
Signal transduction protein.
 
  
 0.921
KRK77922.1
Histidine kinase.
 
 
 0.903
KRK75687.1
Histidine protein kinase.
  
 
 0.655
KRK78372.1
Sensor histidine kinase.
  
 
 0.655
KRK74576.1
Integral membrane sensor signal transduction histidine kinase.
  
 
 0.655
KRK76534.1
Extracellular lipase esterase precursor.
       0.545
KRK75602.1
Hypothetical protein.
  
   
 0.527
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.