STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK78452.1Oxidoreductase. (352 aa)    
Predicted Functional Partners:
KRK78453.1
Chloride channel protein.
  
   0.747
KRK77637.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.579
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.562
KRK78004.1
Hypothetical protein.
  
  
 0.560
KRK77979.1
AP endonuclease, family 2.
  
  
 0.559
KRK77909.1
2-dehydro-3-deoxygluconokinase.
  
  
 0.555
KRK77977.1
2-dehydro-3-deoxygluconokinase.
  
  
 0.555
KRK78454.1
Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.540
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.535
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.525
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.