STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK77923.1Bacteriocin immunity protein. (113 aa)    
Predicted Functional Partners:
KRK77924.1
Hypothetical protein.
       0.701
KRK77925.1
Hypothetical protein.
       0.669
KRK74618.1
Chromosome replication initiation membrane attachment protein B.
  
     0.632
KRK76584.1
Transcriptional regulator.
  
     0.484
KRK77926.1
Hypothetical protein.
       0.474
KRK76602.1
Hypothetical protein.
  
     0.471
KRK78458.1
Integral membrane protein.
  
     0.413
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.