STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRK75121.1Hypothetical protein; Belongs to the UPF0223 family. (97 aa)    
Predicted Functional Partners:
KRK75122.1
Fructose-1 6-bisphosphatase.
 
  
 0.930
KRK74635.1
Hypothetical protein.
  
     0.745
KRK75123.1
GTP-binding protein TypA (stress response GTPase).
       0.702
KRK74705.1
Hypothetical protein.
  
     0.697
KRK75119.1
Acetoin pyruvate dehydrogenase complex, E2 component, dihydrolipoamide succinyltransferase.
       0.570
KRK75423.1
Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
  
     0.524
KRK75120.1
Dihydrolipoamide dehydrogenase.
       0.520
KRK75117.1
Pyruvate dehydrogenase E1 component subunit alpha.
       0.516
KRK75118.1
Pyruvate dehydrogenase.
       0.516
KRK75339.1
Hypothetical protein.
  
     0.516
Your Current Organism:
Lactobacillus alimentarius
NCBI taxonomy Id: 1423720
Other names: L. alimentarius DSM 20249, Lactobacillus alimentarius DSM 20249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.