STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APT18670.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
APT18672.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
APT18671.1
Polar amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
APT19326.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.972
APT18446.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
APT18664.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
glnQ
Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.956
APT18831.1
Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
APT19319.1
Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
APT18736.1
Glutamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.816
APT18673.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.691
Your Current Organism:
Lactobacillus amylophilus
NCBI taxonomy Id: 1423721
Other names: L. amylophilus DSM 20533 = JCM 1125, Lactobacillus amylophilus DSM 20533, Lactobacillus amylophilus DSM 20533 = JCM 1125
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.