STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL87486.1MarR family transcriptional regulator. (148 aa)    
Predicted Functional Partners:
KRL86227.1
PTS system, glucose-specific IIABC component.
  
 
 0.827
KRL87485.1
Multidrug resistance protein B.
 
     0.819
KRL84745.1
Phosphoenolpyruvate-dependent sugar PTS family porter EIIABC, trhalose specific.
   
 
 0.805
KRL87112.1
Pts system, sucrose-specific, eiibca component.
   
 
 0.805
KRL87381.1
Hypothetical protein.
   
 
 0.805
KRL86223.1
PTS system, sucrose-specific IIABC component.
   
 
 0.805
KRL83961.1
Multi-domain beta-ketoacyl synthase.
  
  
 0.614
KRL83963.1
Multi-domain beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.614
KRL87487.1
Beta-1,6-galactofuranosyltransferase.
       0.572
KRL83397.1
Hypothetical protein.
  
     0.568
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.