STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84759.1GntR family transcriptional regulator. (240 aa)    
Predicted Functional Partners:
KRL84758.1
Transcriptional regulator.
 
    
0.838
KRL84765.1
agaS protein.
 
  
 0.635
KRL84766.1
N-acetylglucosamine-6-phosphate deacetylase.
 
    0.592
lacD
Tagatose 1,6-diphosphate aldolase 2; Belongs to the aldolase LacD family.
       0.554
KRL84745.1
Phosphoenolpyruvate-dependent sugar PTS family porter EIIABC, trhalose specific.
  
  
 0.492
KRL87112.1
Pts system, sucrose-specific, eiibca component.
  
  
 0.492
KRL87381.1
Hypothetical protein.
  
  
 0.492
KRL86223.1
PTS system, sucrose-specific IIABC component.
  
  
 0.492
KRL86227.1
PTS system, glucose-specific IIABC component.
  
  
 0.492
KRL84761.1
Phosphotransferase system sugar-specific EIIB component.
  
    0.443
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.