STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL87144.1ABC superfamily ATP binding cassette transporter, permease protein. (219 aa)    
Predicted Functional Partners:
KRL87143.1
ABC-type cobalt transport system, ATPase component.
 
 0.997
KRL87142.1
ABC-type cobalt transport system, permease component.
 
 
 0.995
ecfA
Cobalt transport ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.986
ecfA-2
Cobalt transport ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 0.986
KRL83887.1
Hypothetical protein.
  
 0.980
KRL87366.1
ABC superfamily ATP binding cassette transporter.
  
 0.931
KRL87310.1
ABC-type oligopeptide transport system, ATPase component.
  
 0.866
KRL87190.1
Oligopeptide transport ATP-binding protein oppF; Belongs to the ABC transporter superfamily.
  
 0.866
KRL87359.1
Hypothetical protein.
 
 0.857
KRL87365.1
Hypothetical protein.
  
 0.843
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.