STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL83393.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
KRL83394.1
Saccharopine dehydrogenase related protein.
 
     0.899
KRL83392.1
Oxidoreductase.
 
     0.761
KRL83395.1
Alcohol dehydrogenase.
       0.744
KRL84855.1
Antibiotic biosynthesis monooxygenase.
 
     0.661
guaB
Inosine 5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.542
KRL83396.1
Recombination factor protein RarA.
       0.500
KRL83442.1
Hypothetical protein.
  
     0.494
KRL83391.1
Lipid kinase.
       0.473
KRL85678.1
NADH dehydrogenase.
    
 0.448
KRL85165.1
NADH oxidase.
    
  0.432
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.