STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84098.1Two-component response regulator. (228 aa)    
Predicted Functional Partners:
KRL84097.1
Transmembrane histidine kinase.
 0.990
KRL84529.1
Hypothetical protein.
 0.964
KRL85096.1
Signal transduction histidine kinase.
 0.946
KRL87201.1
Two component system histidine kinase.
  0.932
KRL86589.1
Two-component sensor kinase yycG.
 0.927
KRL83506.1
Two component system histidine kinase.
 0.922
KRL83410.1
ATPase histidine kinase DNA gyrase B HSP90 domain protein.
 
 0.914
KRL83953.1
Sensor histidine kinase.
 0.900
KRL83964.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.719
KRL83450.1
Hypothetical protein.
   
   0.673
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.