STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84103.1Hypothetical protein. (321 aa)    
Predicted Functional Partners:
KRL84105.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 
  0.608
KRL84104.1
Hypothetical protein.
  
    0.558
KRL87198.1
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
    0.493
KRL85090.1
Teichoic acid translocation ATP-binding protein.
  
 
  0.470
KRL84846.1
Hypothetical protein.
  
 
  0.470
KRL87131.1
ABC transporter ATP-binding protein.
  
 
  0.470
KRL87135.1
ABC superfamily ATP binding cassette transporter, ABC protein.
  
 
  0.470
KRL83406.1
Mutacin ABC transporter, ATP-binding protein MutF.
  
 
  0.470
KRL83597.1
ABC transporter, ATP-binding protein.
  
 
  0.470
KRL83618.1
Abpt bacteriocin export accessory protein.
  
 
  0.470
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.