STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL84163.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (282 aa)    
Predicted Functional Partners:
KRL84162.1
Rod shape-determining protein MreD.
  
 
 0.990
KRL84164.1
Rod shape-determining protein MreB.
 
 
 0.986
KRL84203.1
Rod shape-determining protein MreB.
 
 
 0.958
minC
Cell division inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
  
  
 0.949
KRL83696.1
Penicillin-binding protein.
 
 
 0.939
KRL84160.1
Cell division inhibitor.
  
    0.925
KRL84151.1
Penicillin binding protein 2B.
 
 
 0.839
KRL84201.1
Rod shape determining protein; Belongs to the SEDS family.
 
  
 0.732
KRL84166.1
Hypothetical protein.
  
  
 0.709
KRL84167.1
Hypothetical protein.
  
  
 0.709
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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