STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL86587.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
KRL86588.1
Hypothetical protein.
 
  
 0.982
KRL86589.1
Two-component sensor kinase yycG.
 
  
 0.910
KRL86590.1
Two-component response regulator.
  
    0.850
KRL86586.1
Zinc-dependent hydrolase.
  
  
 0.830
KRL86585.1
Endopeptidase.
  
    0.702
KRL84162.1
Rod shape-determining protein MreD.
  
     0.675
KRL85087.1
Hypothetical protein.
  
     0.612
KRL83539.1
Hypothetical protein.
  
     0.584
KRL86197.1
Hypothetical protein.
  
     0.578
KRL84133.1
TPR repeat-containing protein.
  
     0.577
Your Current Organism:
Lactobacillus apodemi
NCBI taxonomy Id: 1423724
Other names: L. apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi DSM 16634, Lactobacillus apodemi DSM 16634 = JCM 16172, Lactobacillus apodemi JCM 16172, Lactobacillus apodemi JCM 16172 = DSM 16634
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.